Trabajos de Jose Gomez-Skarmeta

Trabajos de Nombre

Molecular Biology & Genetics


  Listando 18 trabajos del autor/autora 38
Lista de trabajos en el área Molecular Biology & Genetics
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Article The Shh/Gli3 gene regulatory network precedes the origin of paired fins and reveals the deep homology between distal fins and digits Letelier, Joaquin; Naranjo, Silvia; Sospedra-Arrufat, Ismael; Ramon Martinez-Morales, Juan; Lopez-Rios, Javier; Shubin, Neil; Luis Gomez-Skarmeta, Jose PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 0027-8424 (2021) DOI / 10.1073/pnas.2100575118 Hybrid, Green submitted
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Article A conserved Shh cis-regulatory module highlights a common developmental origin of unpaired and paired fins Letelier, Joaquin; de la Calle-Mustienes, Elisa; Pieretti, Joyce; Naranjo, Silvia; Maeso, Ignacio; Nakamura, Tetsuya; Pascual-Anaya, Juan; Shubin, Neil H.; Schneider, Igor; Ramon Martinez-Morales, Juan; Luis Gomez-Skarmeta, Jose NATURE GENETICS 1061-4036 (2018) DOI / 10.1038/s41588-018-0080-5 Green accepted
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Article CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression Franke, Martin; de la Calle-Mustienes, Elisa; Neto, Ana; Almuedo-Castillo, Maria; Irastorza-Azcarate, Lbai; Acemel, Rafael D.; Tena, Juan J.; Santos-Pereira, Jose M.; Gomez-Skarmeta, Jose L. NATURE COMMUNICATIONS (2021) DOI / 10.1038/s41467-021-25604-5 Green published, Green submitted, Green accepted, Gold
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Article Gene regulatory network architecture in different developmental contexts influences the genetic basis of morphological evolution Kittelmann, Sebastian; Buffry, Alexandra D.; Franke, Franziska A.; Almudi, Isabel; Yoth, Marianne; Sabaris, Gonzalo; Pablo Couso, Juan; Nunes, Maria D. S.; Frankel, Nicolas; Luis Gomez-Skarmeta, Jose; Pueyo-Marques, Jose; Arif, Saad; McGregor, Alistair P. PLOS GENETICS 1553-7390 (2018) DOI / 10.1371/journal.pgen.1007375 Gold, Green published, Green submitted, Green accepted
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Article Evolutionary emergence of the rac3b/rfng/sgca regulatory cluster refined mechanisms for hindbrain boundaries formation Letelier, Joaquin; Terriente, Javier; Belzunce, Ivan; Voltes, Adria; Alberto Undurraga, Cristian; Polvillo, Rocio; Devos, Lucie; Tena, Juan J.; Maeso, Ignacio; Retaux, Sylvie; Luis Gomez-Skarmeta, Jose; Martinez-Morales, Juan R.; Pujades, Cristina PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 0027-8424 (2018) DOI / 10.1073/pnas.1719885115 Green published, Bronze
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Article Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures Garcia-Perez, Raquel; Esteller-Cucala, Paula; Mas, Gloria; Lobon, Irene; Di Carlo, Valerio; Riera, Meritxell; Kuhlwilm, Martin; Navarro, Arcadi; Blancher, Antoine; Di Croce, Luciano; Luis Gomez-Skarmeta, Jose; Juan, David; Marques-Bonet, Tomas NATURE COMMUNICATIONS (2021) DOI / 10.1038/s41467-021-23397-1 Green published, Gold
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Review Cis-regulatory landscapes in development and evolution Maeso, Ignacio; Acemel, Rafael D.; Luis Gomez-Skarmeta, Jose CURRENT OPINION IN GENETICS & DEVELOPMENT 0959-437X (2017) DOI / 10.1016/j.gde.2016.10.004 Green submitted
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Article Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications Touceda-Suarez, Maria; Kita, Elizabeth M.; Acemel, Rafael D.; Firbas, Panos N.; Magri, Marta S.; Naranjo, Silvia; Tena, Juan J.; Gomez-Skarmeta, Jose Luis; Maeso, Ignacio; Irimia, Manuel MOLECULAR BIOLOGY AND EVOLUTION 0737-4038 (2020) DOI / 10.1093/molbev/msaa123 Green published, Gold other
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Editorial Material Reprogramming Nuclear Architecture: Just a TAD Acemel, Rafael D.; Luis Gomez-Skarmeta, Jose CELL STEM CELL 1934-5909 (2019) DOI / 10.1016/j.stem.2019.04.007 Bronze
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Article Asthma-associated genetic variants induce IL33 differential expression through an enhancer-blocking regulatory region Aneas, Ivy; Decker, Donna C.; Howard, Chanie L.; Sobreira, Debora R.; Sakabe, Noboru J.; Blaine, Kelly M.; Stein, Michelle M.; Hrusch, Cara L.; Montefiori, Lindsey E.; Tena, Juan; Magnaye, Kevin M.; Clay, Selene M.; Gern, James E.; Jackson, Daniel J.; Altm NATURE COMMUNICATIONS (2021) DOI / 10.1038/s41467-021-26347-z Gold
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Review An evolutionary perspective of regulatory landscape dynamics in development and disease Franke, Martin; Luis Gomez-Skarmeta, Jose CURRENT OPINION IN CELL BIOLOGY 0955-0674 (2018) DOI / 10.1016/j.ceb.2018.06.009
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Article CTCF counter-regulates cardiomyocyte development and maturation programs in the embryonic heart Gomez-Velazquez, Melisa; Badia-Careaga, Claudio; Victoria Lechuga-Vieco, Ana; Nieto-Arellano, Rocio; Tena, Juan J.; Rollan, Isabel; Alvarez, Alba; Torroja, Carlos; Caceres, Eva F.; Roy, Anna; Galjart, Niels; Delgado-Olguin, Paul; Sanchez-Cabo, Fatima; Anto PLOS GENETICS 1553-7390 (2017) DOI / 10.1371/journal.pgen.1006985 Green published, Gold, Green submitted
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Article yap1b, a divergent Yap/Taz family member, cooperates with yap1 in survival and morphogenesis via common transcriptional targets Vazquez-Marin, Javier; Arturo Gutierrez-Triana, Jose; Almuedo-Castillo, Maria; Buono, Lorena; Luis Gomez-Skarmeta, Jose; Luis Mateo, Juan; Wittbrodt, Joachim; Ramon Martinez-Morales, Juan DEVELOPMENT 0950-1991 (2019) DOI / 10.1242/dev.173286 Bronze, Green published
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Article Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements Vicente-Garcia, Cristina; Villarejo-Balcells, Barbara; Irastorza-Azcarate, Ibai; Naranjo, Silvia; Acemel, Rafael D.; Tena, Juan J.; Rigby, Peter W. J.; Devos, Damien P.; Gomez-Skarmeta, Jose L.; Carvajal, Jaime J. GENOME BIOLOGY 1465-6906 (2017) DOI / 10.1186/s13059-017-1225-z Green published, Gold
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Article Assaying Chromatin Accessibility Using ATAC-Seq in Invertebrate Chordate Embryos Silvia Magri, Marta; Jimenez-Gancedo, Sandra; Bertrand, Stephanie; Madgwick, Alicia; Escriva, Hector; Lemaire, Patrick; Luis Gomez-Skarmeta, Jose FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY 2296-634X (2020) DOI / 10.3389/fcell.2019.00372 Gold, Green published
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Review Topologically associated domains: a successful scaffold for the evolution of gene regulation in animals Acemel, Rafael D.; Maeso, Ignacio; Luis Gomez-Skarmeta, Jose WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY 1759-7684 (2017) DOI / 10.1002/wdev.265
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Article Straightforward protocol for allele-specific chromatin conformation capture Acemel, R. D.; Tena, J. J.; Gomez-Skarmeta, J. L.; Fibla, J.; Royo, J. L. GENE 0378-1119 (2021) DOI / 10.1016/j.gene.2020.145185
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Article A common copy-number variant within SIRPB1 correlates with human Out-of-Africa migration after genetic drift correction Luis Royo, Jose; Valls, Joan; Acemel, Rafael D.; Gomez-Marin, Carlos; Pascual-Pons, Marione; Lupianez, Arenbca; Luis Gomez-Skarmeta, Jose; Fibla, Joan PLOS ONE 1932-6203 (2018) DOI / 10.1371/journal.pone.0193614 Gold DOAJ, Green published